Resources for Medical Imaging & Computer Vision

Python

Medical Imaging

• ITK, VTK and SimpleITK
• IRTK
• Neuroimaging in Python

Machine Learning

• scikit-learn

Computer Vision

• scikit-image
• OpenCV
• VLFeat with no official Python port, but some partial attempts:
• pyvlfeat
• vlfeat-ctypes
• search on github for the most up-to-date forks
• VIGRA

Reading lists

• Reproducible Research in Computational Science, by Xin Li (West Virginia University)
• Visual Recognition course, by Kristen Grauman (University of Texas at Austin)
• Image Understanding course, by David Lowe (University of British Columbia)
• A Numerical Tour of Signal Processing, by Gabriel Peyre (Université Paris-Dauphine)